3D structure

PDB id
6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with ribosome recycling factor
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CUAG*CAAUAGAUAUAGUAC*GGAAAG
Length
25 nucleotides
Bulged bases
6ZS9|1|XA|U|1774
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZS9|1|XA|C|1678
6ZS9|1|XA|U|1679
6ZS9|1|XA|A|1680
6ZS9|1|XA|G|1681
*
6ZS9|1|XA|C|1771
6ZS9|1|XA|A|1772
6ZS9|1|XA|A|1773
6ZS9|1|XA|U|1774
6ZS9|1|XA|A|1775
6ZS9|1|XA|G|1776
6ZS9|1|XA|A|1777
6ZS9|1|XA|U|1778
6ZS9|1|XA|A|1779
6ZS9|1|XA|U|1780
6ZS9|1|XA|A|1781
6ZS9|1|XA|G|1782
6ZS9|1|XA|U|1783
6ZS9|1|XA|A|1784
6ZS9|1|XA|C|1785
*
6ZS9|1|XA|G|1792
6ZS9|1|XA|G|1793
6ZS9|1|XA|A|1794
6ZS9|1|XA|A|1795
6ZS9|1|XA|A|1796
6ZS9|1|XA|G|1797

Current chains

Chain XA
16S rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain XF
39S ribosomal protein L4, mitochondrial
Chain XR
39S ribosomal protein L20, mitochondrial
Chain XU
39S ribosomal protein L23, mitochondrial
Chain XV
39S ribosomal protein L24, mitochondrial
Chain XY
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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