3D structure

PDB id
6ZS9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with ribosome recycling factor
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
GCA*UCAAUUGAUCC*GACCAAC
Length
21 nucleotides
Bulged bases
6ZS9|1|XA|U|2895, 6ZS9|1|XA|A|2914
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6ZS9|1|XA|G|2846
6ZS9|1|XA|C|2847
6ZS9|1|XA|A|2848
*
6ZS9|1|XA|U|2890
6ZS9|1|XA|C|2891
6ZS9|1|XA|A|2892
6ZS9|1|XA|A|2893
6ZS9|1|XA|U|2894
6ZS9|1|XA|U|2895
6ZS9|1|XA|G|2896
6ZS9|1|XA|A|2897
6ZS9|1|XA|U|2898
6ZS9|1|XA|C|2899
6ZS9|1|XA|C|2900
*
6ZS9|1|XA|G|2909
6ZS9|1|XA|A|2910
6ZS9|1|XA|C|2911
6ZS9|1|XA|C|2912
6ZS9|1|XA|A|2913
6ZS9|1|XA|A|2914
6ZS9|1|XA|C|2915

Current chains

Chain XA
16S rRNA

Nearby chains

Chain 1
39S ribosomal protein L33, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain XM
39S ribosomal protein L15, mitochondrial
Chain XP
Mitochondrial ribosomal protein L18, isoform CRA_b
Chain XW
39S ribosomal protein L27, mitochondrial
Chain XX
39S ribosomal protein L28, mitochondrial

Coloring options:

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