J3_6ZSD_015

3D structure

PDB id

6ZSD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

6ZSD|1|AA|U|1229, 6ZSD|1|AA|C|1230, 6ZSD|1|AA|A|1231, 6ZSD|1|AA|A|1232, 6ZSD|1|AA|C|1233

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZSD|1|AA|U|1210
6ZSD|1|AA|G|1211
6ZSD|1|AA|U|1212
6ZSD|1|AA|A|1213
6ZSD|1|AA|A|1214
6ZSD|1|AA|U|1215
6ZSD|1|AA|C|1216
*
6ZSD|1|AA|G|1227
6ZSD|1|AA|A|1228
6ZSD|1|AA|U|1229
6ZSD|1|AA|C|1230
6ZSD|1|AA|A|1231
6ZSD|1|AA|A|1232
6ZSD|1|AA|C|1233
6ZSD|1|AA|C|1234
6ZSD|1|AA|U|1235
6ZSD|1|AA|C|1236
6ZSD|1|AA|A|1237
6ZSD|1|AA|C|1238
*
6ZSD|1|AA|G|1351
6ZSD|1|AA|C|1352
6ZSD|1|AA|A|1353
6ZSD|1|AA|A|1354

Current chains

Chain AA

12SrRNA

Nearby chains

Chain AG

28S ribosomal protein S9, mitochondrial

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial