J3_6ZTJ_009

3D structure

PDB id

6ZTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAGU*AUGUGC*GAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZTJ|1|AA|G|1003
6ZTJ|1|AA|A|1004
6ZTJ|1|AA|A|1005
6ZTJ|1|AA|G|1006
6ZTJ|1|AA|U|1007
*
6ZTJ|1|AA|A|1022
6ZTJ|1|AA|U|1023
6ZTJ|1|AA|G|1024
6ZTJ|1|AA|U|1025
6ZTJ|1|AA|G|1026
6ZTJ|1|AA|C|1027
*
6ZTJ|1|AA|G|1034
6ZTJ|1|AA|A|1035
6ZTJ|1|AA|A|1036
6ZTJ|1|AA|C|1037

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14