J3_6ZTL_016

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

6ZTL|1|BA|U|686, 6ZTL|1|BA|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ZTL_016 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0946

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

6ZTL|1|BA|U|683
6ZTL|1|BA|G|684
6ZTL|1|BA|A|685
6ZTL|1|BA|U|686
6ZTL|1|BA|C|687
6ZTL|1|BA|U|688
6ZTL|1|BA|A|689
*
6ZTL|1|BA|U|773
6ZTL|1|BA|G|774
6ZTL|1|BA|G|775
*
6ZTL|1|BA|C|791
6ZTL|1|BA|A|792
6ZTL|1|BA|A|793
6ZTL|1|BA|A|794

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L34

Chain BC

50S ribosomal protein L2

Chain BE

50S ribosomal protein L4