J3_6ZTL_017

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ZTL_017 not in the Motif Atlas

Homologous match to J3_7RQB_005

Geometric discrepancy: 0.0932

The information below is about J3_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.4

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

6ZTL|1|BA|C|698
6ZTL|1|BA|A|699
6ZTL|1|BA|G|700
*
6ZTL|1|BA|C|732
6ZTL|1|BA|G|733
6ZTL|1|BA|A|734
6ZTL|1|BA|A|735
6ZTL|1|BA|C|736
*
6ZTL|1|BA|G|760
6ZTL|1|BA|A|761
6ZTL|1|BA|U|762
6ZTL|1|BA|G|763

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2