J3_6ZTL_024

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

6ZTL|1|BA|A|2518, 6ZTL|1|BA|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ZTL_024 not in the Motif Atlas

Homologous match to J3_5J7L_046

Geometric discrepancy: 0.131

The information below is about J3_5J7L_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

6ZTL|1|BA|C|2517
6ZTL|1|BA|A|2518
6ZTL|1|BA|U|2519
6ZTL|1|BA|C|2520
*
6ZTL|1|BA|G|2545
6ZTL|1|BA|U|2546
6ZTL|1|BA|A|2547
*
6ZTL|1|BA|U|2561
6ZTL|1|BA|U|2562
6ZTL|1|BA|U|2563
6ZTL|1|BA|A|2564
6ZTL|1|BA|A|2565
6ZTL|1|BA|A|2566
6ZTL|1|BA|G|2567

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BL

50S ribosomal protein L14