J3_6ZTL_031

3D structure

PDB id

6ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in collided state bound to NusG

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

6ZTL|1|AA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ZTL_031 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1914

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

6ZTL|1|AA|C|990
6ZTL|1|AA|U|991
6ZTL|1|AA|U|992
6ZTL|1|AA|G|993
6ZTL|1|AA|A|994
6ZTL|1|AA|C|995
6ZTL|1|AA|A|996
6ZTL|1|AA|U|997
*
6ZTL|1|AA|A|1044
6ZTL|1|AA|C|1045
6ZTL|1|AA|A|1046
6ZTL|1|AA|G|1047
*
6ZTL|1|AA|C|1210
6ZTL|1|AA|U|1211
6ZTL|1|AA|U|1212
6ZTL|1|AA|A|1213
6ZTL|1|AA|C|1214
6ZTL|1|AA|G|1215

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AN

30S ribosomal protein S14