J3_6ZTO_027
3D structure
- PDB id
- 6ZTO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-RNAP expressome complex in uncoupled state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GCCGUAG*CGC*GGAAC
- Length
- 15 nucleotides
- Bulged bases
- 6ZTO|1|BB|U|14, 6ZTO|1|BB|A|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ZTO_027 not in the Motif Atlas
- Homologous match to J3_5J7L_049
- Geometric discrepancy: 0.0587
- The information below is about J3_5J7L_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89095.1
- Basepair signature
- cWW-F-F-F-tHS-F-cWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
6ZTO|1|BB|G|10
6ZTO|1|BB|C|11
6ZTO|1|BB|C|12
6ZTO|1|BB|G|13
6ZTO|1|BB|U|14
6ZTO|1|BB|A|15
6ZTO|1|BB|G|16
*
6ZTO|1|BB|C|68
6ZTO|1|BB|G|69
6ZTO|1|BB|C|70
*
6ZTO|1|BB|G|106
6ZTO|1|BB|G|107
6ZTO|1|BB|A|108
6ZTO|1|BB|A|109
6ZTO|1|BB|C|110
Current chains
- Chain BB
- 5S ribosomal RNA
Nearby chains
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BP
- 50S ribosomal protein L18
- Chain BW
- 50S ribosomal protein L25
- Chain BX
- 50S ribosomal protein L27
Coloring options: