3D structure

PDB id
6ZTO (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CUUGACAU*ACAG*CUUACG
Length
18 nucleotides
Bulged bases
6ZTO|1|AA|C|1214
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6ZTO_030 not in the Motif Atlas
Homologous match to J3_5J7L_053
Geometric discrepancy: 0.1036
The information below is about J3_5J7L_053
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_76475.2
Basepair signature
cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
Number of instances in this motif group
2

Unit IDs

6ZTO|1|AA|C|990
6ZTO|1|AA|U|991
6ZTO|1|AA|U|992
6ZTO|1|AA|G|993
6ZTO|1|AA|A|994
6ZTO|1|AA|C|995
6ZTO|1|AA|A|996
6ZTO|1|AA|U|997
*
6ZTO|1|AA|A|1044
6ZTO|1|AA|C|1045
6ZTO|1|AA|A|1046
6ZTO|1|AA|G|1047
*
6ZTO|1|AA|C|1210
6ZTO|1|AA|U|1211
6ZTO|1|AA|U|1212
6ZTO|1|AA|A|1213
6ZTO|1|AA|C|1214
6ZTO|1|AA|G|1215

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AN
30S ribosomal protein S14

Coloring options:


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