3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CAAG*CUAGUAA*UGAAUACG
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6ZTP_005 not in the Motif Atlas
Homologous match to J3_4LFB_002
Geometric discrepancy: 0.0698
The information below is about J3_4LFB_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_25303.4
Basepair signature
cWW-F-F-cSS-F-cWW-tWW-F-tWH-F-tHS-cSH-cWW
Number of instances in this motif group
4

Unit IDs

6ZTP|1|AA|C|936
6ZTP|1|AA|A|937
6ZTP|1|AA|A|938
6ZTP|1|AA|G|939
*
6ZTP|1|AA|C|1344
6ZTP|1|AA|U|1345
6ZTP|1|AA|A|1346
6ZTP|1|AA|G|1347
6ZTP|1|AA|U|1348
6ZTP|1|AA|A|1349
6ZTP|1|AA|A|1350
*
6ZTP|1|AA|U|1372
6ZTP|1|AA|G|1373
6ZTP|1|AA|A|1374
6ZTP|1|AA|A|1375
6ZTP|1|AA|U|1376
6ZTP|1|AA|A|1377
6ZTP|1|AA|C|1378
6ZTP|1|AA|G|1379

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AG
30S ribosomal protein S7
Chain AI
30S ribosomal protein S9

Coloring options:


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