J3_6ZTP_015

3D structure

PDB id

6ZTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-RNAP expressome complex in uncoupled state 6

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AC*GAUAAGC*GAUUU

Length

14 nucleotides

Bulged bases

6ZTP|1|BA|A|74

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6ZTP_015 not in the Motif Atlas

Homologous match to J3_5J7L_037

Geometric discrepancy: 0.0668

The information below is about J3_5J7L_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_35667.2

Basepair signature

cWW-cWW-F-F-F-cWW-F-cWW

Number of instances in this motif group

7

Unit IDs

6ZTP|1|BA|A|56
6ZTP|1|BA|C|57
*
6ZTP|1|BA|G|70
6ZTP|1|BA|A|71
6ZTP|1|BA|U|72
6ZTP|1|BA|A|73
6ZTP|1|BA|A|74
6ZTP|1|BA|G|75
6ZTP|1|BA|C|76
*
6ZTP|1|BA|G|110
6ZTP|1|BA|A|111
6ZTP|1|BA|U|112
6ZTP|1|BA|U|113
6ZTP|1|BA|U|114

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L34

Chain BU

50S ribosomal protein L23

Chain BZ

50S ribosomal protein L29