3D structure

PDB id
6ZTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-RNAP expressome complex in uncoupled state 6
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
UAU*AGACUGC*GAGGAAGGUG
Length
20 nucleotides
Bulged bases
6ZTP|1|AA|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6ZTP_031 not in the Motif Atlas
Homologous match to J3_5J7L_054
Geometric discrepancy: 0.1009
The information below is about J3_5J7L_054
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_17791.2
Basepair signature
cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
Number of instances in this motif group
2

Unit IDs

6ZTP|1|AA|U|1116
6ZTP|1|AA|A|1117
6ZTP|1|AA|U|1118
*
6ZTP|1|AA|A|1155
6ZTP|1|AA|G|1156
6ZTP|1|AA|A|1157
6ZTP|1|AA|C|1158
6ZTP|1|AA|U|1159
6ZTP|1|AA|G|1160
6ZTP|1|AA|C|1161
*
6ZTP|1|AA|G|1175
6ZTP|1|AA|A|1176
6ZTP|1|AA|G|1177
6ZTP|1|AA|G|1178
6ZTP|1|AA|A|1179
6ZTP|1|AA|A|1180
6ZTP|1|AA|G|1181
6ZTP|1|AA|G|1182
6ZTP|1|AA|U|1183
6ZTP|1|AA|G|1184

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AG
30S ribosomal protein S7
Chain AI
30S ribosomal protein S9
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14

Coloring options:


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