J3_6ZVJ_015
3D structure
- PDB id
- 6ZVJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human ABCE1-bound 43S pre-initiation complex - State II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGUUCUUAG*CGAGAC*GCAAUAACAG
- Length
- 25 nucleotides
- Bulged bases
- 6ZVJ|1|2|A|1489
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZVJ|1|2|C|1337
6ZVJ|1|2|G|1338
6ZVJ|1|2|U|1339
6ZVJ|1|2|U|1340
6ZVJ|1|2|C|1341
6ZVJ|1|2|U|1342
6ZVJ|1|2|U|1343
6ZVJ|1|2|A|1344
6ZVJ|1|2|G|1345
*
6ZVJ|1|2|C|1384
6ZVJ|1|2|G|1385
6ZVJ|1|2|A|1386
6ZVJ|1|2|G|1387
6ZVJ|1|2|A|1388
6ZVJ|1|2|C|1389
*
6ZVJ|1|2|G|1481
6ZVJ|1|2|C|1482
6ZVJ|1|2|A|1483
6ZVJ|1|2|A|1484
6ZVJ|1|2|U|1485
6ZVJ|1|2|A|1486
6ZVJ|1|2|A|1487
6ZVJ|1|2|C|1488
6ZVJ|1|2|A|1489
6ZVJ|1|2|G|1490
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain b
- 40S ribosomal protein S3
- Chain d
- 40S ribosomal protein S2
- Chain g
- 40S ribosomal protein S16
- Chain h
- 40S ribosomal protein S20
- Chain l
- 40S ribosomal protein S29
- Chain w
- 40S ribosomal protein S17
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