J3_6ZXG_003

3D structure

PDB id

6ZXG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CAUUC*GGACCAGAG*CAUU(PSU)G

Length

20 nucleotides

Bulged bases

6ZXG|1|2|G|991

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXG|1|2|C|937
6ZXG|1|2|A|938
6ZXG|1|2|U|939
6ZXG|1|2|U|940
6ZXG|1|2|C|941
*
6ZXG|1|2|G|985
6ZXG|1|2|G|986
6ZXG|1|2|A|987
6ZXG|1|2|C|988
6ZXG|1|2|C|989
6ZXG|1|2|A|990
6ZXG|1|2|G|991
6ZXG|1|2|A|992
6ZXG|1|2|G|993
*
6ZXG|1|2|C|1000
6ZXG|1|2|A|1001
6ZXG|1|2|U|1002
6ZXG|1|2|U|1003
6ZXG|1|2|PSU|1004
6ZXG|1|2|G|1005

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain B

40S ribosomal protein S3a

Chain N

40S ribosomal protein S13

Chain O

40S ribosomal protein S14

Chain h

40S ribosomal protein S26

Chain k

Leucine-rich repeat-containing protein 47