J3_6ZXH_003

3D structure

PDB id

6ZXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAUUC*GGACCAGAG*CAUU(PSU)G

Length

20 nucleotides

Bulged bases

6ZXH|1|2|G|991

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZXH|1|2|C|937
6ZXH|1|2|A|938
6ZXH|1|2|U|939
6ZXH|1|2|U|940
6ZXH|1|2|C|941
*
6ZXH|1|2|G|985
6ZXH|1|2|G|986
6ZXH|1|2|A|987
6ZXH|1|2|C|988
6ZXH|1|2|C|989
6ZXH|1|2|A|990
6ZXH|1|2|G|991
6ZXH|1|2|A|992
6ZXH|1|2|G|993
*
6ZXH|1|2|C|1000
6ZXH|1|2|A|1001
6ZXH|1|2|U|1002
6ZXH|1|2|U|1003
6ZXH|1|2|PSU|1004
6ZXH|1|2|G|1005

Current chains

Chain 2

pre-18S ribosomal RNA

Nearby chains

Chain B

40S ribosomal protein S3a

Chain N

40S ribosomal protein S13

Chain O

40S ribosomal protein S14

Chain h

40S ribosomal protein S26