J3_7A09_003

3D structure

PDB id

7A09 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human ABCE1-bound 43S pre-initiation complex - State III

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAUUC*GGACCAGAG*CAUUUG

Length

20 nucleotides

Bulged bases

7A09|1|2|G|991

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7A09|1|2|C|937
7A09|1|2|A|938
7A09|1|2|U|939
7A09|1|2|U|940
7A09|1|2|C|941
*
7A09|1|2|G|985
7A09|1|2|G|986
7A09|1|2|A|987
7A09|1|2|C|988
7A09|1|2|C|989
7A09|1|2|A|990
7A09|1|2|G|991
7A09|1|2|A|992
7A09|1|2|G|993
*
7A09|1|2|C|1000
7A09|1|2|A|1001
7A09|1|2|U|1002
7A09|1|2|U|1003
7A09|1|2|U|1004
7A09|1|2|G|1005

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain Q

40S ribosomal protein S26

Chain i

40S ribosomal protein S14

Chain m

40S ribosomal protein S13

Chain p

40S ribosomal protein S3a