J3_7A09_016
3D structure
- PDB id
- 7A09 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human ABCE1-bound 43S pre-initiation complex - State III
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 7A09|1|2|A|1454, 7A09|1|2|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7A09|1|2|C|1391
7A09|1|2|U|1392
7A09|1|2|G|1393
7A09|1|2|G|1394
7A09|1|2|C|1395
*
7A09|1|2|G|1450
7A09|1|2|G|1451
7A09|1|2|A|1452
7A09|1|2|C|1453
7A09|1|2|A|1454
7A09|1|2|A|1455
7A09|1|2|G|1456
*
7A09|1|2|C|1470
7A09|1|2|C|1471
7A09|1|2|C|1472
7A09|1|2|G|1473
7A09|1|2|A|1474
7A09|1|2|G|1475
7A09|1|2|A|1476
7A09|1|2|U|1477
7A09|1|2|U|1478
7A09|1|2|G|1479
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain N
- Eukaryotic translation initiation factor 3 subunit D
- Chain S
- 40S ribosomal protein S28
- Chain V
- Receptor of activated protein C kinase 1
- Chain b
- 40S ribosomal protein S3
- Chain e
- 40S ribosomal protein S5
- Chain g
- 40S ribosomal protein S16
- Chain h
- 40S ribosomal protein S20
- Chain l
- 40S ribosomal protein S29
- Chain w
- 40S ribosomal protein S17
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