J3_7A0S_001

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GC*GUGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_60031.1

Basepair signature

cWW-tWH-cWW-tSH-F-cWW-F

Number of instances in this motif group

6

Unit IDs

7A0S|1|X|G|30
7A0S|1|X|C|31
*
7A0S|1|X|G|485
7A0S|1|X|U|486
7A0S|1|X|G|487
7A0S|1|X|A|488
7A0S|1|X|A|489
7A0S|1|X|A|490
7A0S|1|X|A|491
7A0S|1|X|G|492
*
7A0S|1|X|C|519
7A0S|1|X|C|520

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain N

50S ribosomal protein L20

Chain P

50S ribosomal protein L22

Chain R

50S ribosomal protein L24