J3_7A0S_005

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.7

Basepair signature

cWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

7A0S|1|X|C|711
7A0S|1|X|A|712
7A0S|1|X|G|713
*
7A0S|1|X|C|745
7A0S|1|X|G|746
7A0S|1|X|A|747
7A0S|1|X|A|748
7A0S|1|X|C|749
*
7A0S|1|X|G|773
7A0S|1|X|A|774
7A0S|1|X|U|775
7A0S|1|X|G|776

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain A

50S ribosomal protein L2