J3_7A0S_006

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CGUAAG*CGA*UAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7A0S|1|X|C|1311
7A0S|1|X|G|1312
7A0S|1|X|U|1313
7A0S|1|X|A|1314
7A0S|1|X|A|1315
7A0S|1|X|G|1316
*
7A0S|1|X|C|1641
7A0S|1|X|G|1642
7A0S|1|X|A|1643
*
7A0S|1|X|U|1656
7A0S|1|X|A|1657
7A0S|1|X|A|1658
7A0S|1|X|G|1659

Current chains

Chain X

RNA (2732-MER)

Nearby chains