J3_7A0S_008

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

CUG*CGGCCUAAGGUAG*CGAAAG

Length

22 nucleotides

Bulged bases

7A0S|1|X|C|1891, 7A0S|1|X|A|1954

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_96459.1

Basepair signature

cWW-F-cHW-F-cWW-tSS-F-cSS-F-F-tWH-F-tHS-F-cWW-cSH

Number of instances in this motif group

1

Unit IDs

7A0S|1|X|C|1825
7A0S|1|X|U|1826
7A0S|1|X|G|1827
*
7A0S|1|X|C|1888
7A0S|1|X|G|1889
7A0S|1|X|G|1890
7A0S|1|X|C|1891
7A0S|1|X|C|1908
7A0S|1|X|U|1909
7A0S|1|X|A|1910
7A0S|1|X|A|1911
7A0S|1|X|G|1912
7A0S|1|X|G|1913
7A0S|1|X|U|1914
7A0S|1|X|A|1915
7A0S|1|X|G|1916
*
7A0S|1|X|C|1950
7A0S|1|X|G|1951
7A0S|1|X|A|1952
7A0S|1|X|A|1953
7A0S|1|X|A|1954
7A0S|1|X|G|1955

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain A

50S ribosomal protein L2