J3_7A0S_018

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UCGGGAC*GACAG*CA

Length

14 nucleotides

Bulged bases

7A0S|1|X|A|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_31965.1

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

5

Unit IDs

7A0S|1|X|U|1357
7A0S|1|X|C|1358
7A0S|1|X|G|1359
7A0S|1|X|G|1360
7A0S|1|X|G|1361
7A0S|1|X|A|1362
7A0S|1|X|C|1363
*
7A0S|1|X|G|1394
7A0S|1|X|A|1395
7A0S|1|X|C|1396
7A0S|1|X|A|1397
7A0S|1|X|G|1398
*
7A0S|1|X|C|1415
7A0S|1|X|A|1416

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain Q

50S ribosomal protein L23