J3_7A0S_019

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.3

Basepair signature

cWW-tSH-tSH-tHH-F-F-cWW-F-cWW

Number of instances in this motif group

4

Unit IDs

7A0S|1|X|G|1438
7A0S|1|X|G|1439
7A0S|1|X|G|1440
7A0S|1|X|A|1441
7A0S|1|X|C|1442
7A0S|1|X|G|1443
*
7A0S|1|X|C|1580
7A0S|1|X|C|1581
*
7A0S|1|X|G|1584
7A0S|1|X|A|1585
7A0S|1|X|A|1586
7A0S|1|X|A|1587
7A0S|1|X|A|1588
7A0S|1|X|G|1589
7A0S|1|X|C|1590

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain A

50S ribosomal protein L2