J3_7A5I_015
3D structure
- PDB id
- 7A5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitoribosome with A- P-and E-site mt-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AAAAUUUAACACCCAUAG*CAAUUAAG*CAACACCCACUACCUAAAAAAUCCCAAACAUAUAACU
- Length
- 63 nucleotides
- Bulged bases
- 7A5I|1|A3|A|2154, 7A5I|1|A3|U|2158, 7A5I|1|A3|C|2219, 7A5I|1|A3|C|2224, 7A5I|1|A3|C|2225, 7A5I|1|A3|U|2233, 7A5I|1|A3|C|2234, 7A5I|1|A3|A|2241, 7A5I|1|A3|U|2242, 7A5I|1|A3|A|2243, 7A5I|1|A3|U|2244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7A5I|1|A3|A|2153
7A5I|1|A3|A|2154
7A5I|1|A3|A|2155
7A5I|1|A3|A|2156
7A5I|1|A3|U|2157
7A5I|1|A3|U|2158
7A5I|1|A3|U|2159
7A5I|1|A3|A|2160
7A5I|1|A3|A|2161
7A5I|1|A3|C|2162
7A5I|1|A3|A|2163
7A5I|1|A3|C|2164
7A5I|1|A3|C|2165
7A5I|1|A3|C|2166
7A5I|1|A3|A|2167
7A5I|1|A3|U|2168
7A5I|1|A3|A|2169
7A5I|1|A3|G|2170
*
7A5I|1|A3|C|2190
7A5I|1|A3|A|2191
7A5I|1|A3|A|2192
7A5I|1|A3|U|2193
7A5I|1|A3|U|2194
7A5I|1|A3|A|2195
7A5I|1|A3|A|2196
7A5I|1|A3|G|2197
*
7A5I|1|A3|C|2212
7A5I|1|A3|A|2213
7A5I|1|A3|A|2214
7A5I|1|A3|C|2215
7A5I|1|A3|A|2216
7A5I|1|A3|C|2217
7A5I|1|A3|C|2218
7A5I|1|A3|C|2219
7A5I|1|A3|A|2220
7A5I|1|A3|C|2221
7A5I|1|A3|U|2222
7A5I|1|A3|A|2223
7A5I|1|A3|C|2224
7A5I|1|A3|C|2225
7A5I|1|A3|U|2226
7A5I|1|A3|A|2227
7A5I|1|A3|A|2228
7A5I|1|A3|A|2229
7A5I|1|A3|A|2230
7A5I|1|A3|A|2231
7A5I|1|A3|A|2232
7A5I|1|A3|U|2233
7A5I|1|A3|C|2234
7A5I|1|A3|C|2235
7A5I|1|A3|C|2236
7A5I|1|A3|A|2237
7A5I|1|A3|A|2238
7A5I|1|A3|A|2239
7A5I|1|A3|C|2240
7A5I|1|A3|A|2241
7A5I|1|A3|U|2242
7A5I|1|A3|A|2243
7A5I|1|A3|U|2244
7A5I|1|A3|A|2245
7A5I|1|A3|A|2246
7A5I|1|A3|C|2247
7A5I|1|A3|U|2248
Current chains
- Chain A3
- 16S rRNA
Nearby chains
- Chain 43
- 39S ribosomal protein L36, mitochondrial
- Chain E3
- 39S ribosomal protein L3, mitochondrial
- Chain I3
- 39S ribosomal protein L10, mitochondrial
- Chain J3
- 39S ribosomal protein L11, mitochondrial
- Chain K3
- 39S ribosomal protein L13, mitochondrial
- Chain N3
- 39S ribosomal protein L16, mitochondrial
- Chain R3
- 39S ribosomal protein L20, mitochondrial
- Chain S3
- 39S ribosomal protein L21, mitochondrial
- Chain j3
- cDNA FLJ76418, highly similar to Homo sapiens mitochondrial ribosomal protein L52 (MRPL52), transcript variant 1, mRNA
- Chain k3
- 39S ribosomal protein L53, mitochondrial
- Chain l3
- 39S ribosomal protein L54, mitochondrial
- Chain o3
- Ribosomal protein 63, mitochondrial
- Chain r3
- 39S ribosomal protein S18a, mitochondrial
Coloring options: