J3_7ABI_001
3D structure
- PDB id
- 7ABI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-Bact-2 spliceosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8 Å
Loop
- Sequence
- GCCUUUUGG*CAU*ACGCAAAUU
- Length
- 21 nucleotides
- Bulged bases
- 7ABI|1|2|U|17, 7ABI|1|2|U|18, 7ABI|1|6|C|79, 7ABI|1|6|G|80, 7ABI|1|6|C|81, 7ABI|1|6|A|82
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ABI|1|2|G|12
7ABI|1|2|C|13
7ABI|1|2|C|14
7ABI|1|2|U|15
7ABI|1|2|U|16
7ABI|1|2|U|17
7ABI|1|2|U|18
7ABI|1|2|G|19
7ABI|1|2|G|20
*
7ABI|1|6|C|55
7ABI|1|6|A|56
7ABI|1|6|U|57
*
7ABI|1|6|A|78
7ABI|1|6|C|79
7ABI|1|6|G|80
7ABI|1|6|C|81
7ABI|1|6|A|82
7ABI|1|6|A|83
7ABI|1|6|A|84
7ABI|1|6|U|85
7ABI|1|6|U|86
Current chains
- Chain 2
- U2 snRNA
- Chain 6
- U6 snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain G
- Pleiotropic regulator 1
- Chain O
- Crooked neck-like protein 1
- Chain t
- RING-type E3 ubiquitin-protein ligase PPIL2
- Chain v
- SNW domain-containing protein 1
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