J3_7AC7_028

3D structure

PDB id

7AC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of accomodated trans-translation complex on E. Coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

7AC7|1|1|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7AC7_028 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.08

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7AC7|1|1|G|297
7AC7|1|1|G|298
7AC7|1|1|A|299
7AC7|1|1|A|300
7AC7|1|1|G|301
*
7AC7|1|1|C|316
7AC7|1|1|G|317
7AC7|1|1|C|318
7AC7|1|1|G|319
7AC7|1|1|A|320
7AC7|1|1|U|321
7AC7|1|1|A|322
7AC7|1|1|C|323
7AC7|1|1|A|324
7AC7|1|1|G|325
*
7AC7|1|1|C|337
7AC7|1|1|G|338
7AC7|1|1|U|339
7AC7|1|1|A|340
7AC7|1|1|C|341

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L4

Chain U

50S ribosomal protein L24