J3_7ACR_003

3D structure

PDB id

7ACR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of post-translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

7ACR|1|1|U|686, 7ACR|1|1|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ACR_003 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.1024

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7ACR|1|1|U|683
7ACR|1|1|G|684
7ACR|1|1|A|685
7ACR|1|1|U|686
7ACR|1|1|C|687
7ACR|1|1|U|688
7ACR|1|1|A|689
*
7ACR|1|1|U|773
7ACR|1|1|G|774
7ACR|1|1|G|775
*
7ACR|1|1|C|791
7ACR|1|1|A|792
7ACR|1|1|A|793
7ACR|1|1|A|794

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L2

Chain d

50S ribosomal protein L34