J3_7AF8_005

3D structure

PDB id

7AF8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state E (head domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GAAG*UGUGC*GAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AF8|1|1|G|1003
7AF8|1|1|A|1004
7AF8|1|1|A|1005
7AF8|1|1|G|1006
*
7AF8|1|1|U|1023
7AF8|1|1|G|1024
7AF8|1|1|U|1025
7AF8|1|1|G|1026
7AF8|1|1|C|1027
*
7AF8|1|1|G|1034
7AF8|1|1|A|1035
7AF8|1|1|A|1036
7AF8|1|1|C|1037

Current chains

Chain 1

16SrRNA (head domain of the 30S ribosome

Nearby chains

Chain N

30S ribosomal protein S14