J3_7AFL_007

3D structure

PDB id

7AFL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state D (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UAGAAU*GGAAUACCGGUGG*CGG

Length

22 nucleotides

Bulged bases

7AFL|1|A|U|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AFL|1|A|U|672
7AFL|1|A|A|673
7AFL|1|A|G|674
7AFL|1|A|A|675
7AFL|1|A|A|676
7AFL|1|A|U|677
*
7AFL|1|A|G|713
7AFL|1|A|G|714
7AFL|1|A|A|715
7AFL|1|A|A|716
7AFL|1|A|U|717
7AFL|1|A|A|718
7AFL|1|A|C|719
7AFL|1|A|C|720
7AFL|1|A|G|721
7AFL|1|A|G|722
7AFL|1|A|U|723
7AFL|1|A|G|724
7AFL|1|A|G|725
*
7AFL|1|A|C|732
7AFL|1|A|G|733
7AFL|1|A|G|734

Current chains

Chain A

16SrRNA

Nearby chains

Chain F

30S ribosomal protein S6

Chain K

30S ribosomal protein S11

Chain O

30S ribosomal protein S15

Chain R

30S ribosomal protein S18

Chain V

Ribosome-binding factor A