J3_7ASM_008

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

GCGAAG*CGUC*GGGAGAAGACAUUGUGUCUUCGAGUCGUU

Length

39 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASM|1|A|G|1485
7ASM|1|A|C|1486
7ASM|1|A|G|1487
7ASM|1|A|A|1488
7ASM|1|A|A|1489
7ASM|1|A|G|1490
*
7ASM|1|A|C|1508
7ASM|1|A|G|1509
7ASM|1|A|U|1510
7ASM|1|A|C|1511
*
7ASM|1|A|G|1570
7ASM|1|A|G|1571
7ASM|1|A|G|1572
7ASM|1|A|A|1573
7ASM|1|A|G|1574
7ASM|1|A|A|1575
7ASM|1|A|A|1576
7ASM|1|A|G|1577
7ASM|1|A|A|1578
7ASM|1|A|C|1579
7ASM|1|A|A|1580
7ASM|1|A|U|1581
7ASM|1|A|U|1582
7ASM|1|A|G|1583
7ASM|1|A|U|1584
7ASM|1|A|G|1585
7ASM|1|A|U|1586
7ASM|1|A|C|1587
7ASM|1|A|U|1588
7ASM|1|A|U|1589
7ASM|1|A|C|1590
7ASM|1|A|G|1591
7ASM|1|A|A|1592
7ASM|1|A|G|1593
7ASM|1|A|U|1594
7ASM|1|A|C|1595
7ASM|1|A|G|1596
7ASM|1|A|U|1597
7ASM|1|A|U|1598

Current chains

Chain A

23S rRNA

Nearby chains