J3_7ASM_009

3D structure

PDB id

7ASM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

UUG*CUAACCC*GGAGACAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASM|1|A|U|2118
7ASM|1|A|U|2119
7ASM|1|A|G|2120
*
7ASM|1|A|C|2223
7ASM|1|A|U|2224
7ASM|1|A|A|2225
7ASM|1|A|A|2226
7ASM|1|A|C|2227
7ASM|1|A|C|2228
7ASM|1|A|C|2229
*
7ASM|1|A|G|2248
7ASM|1|A|G|2249
7ASM|1|A|A|2250
7ASM|1|A|G|2251
7ASM|1|A|A|2252
7ASM|1|A|C|2253
7ASM|1|A|A|2254
7ASM|1|A|G|2255

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain V

50S ribosomal protein L28