Loop J3_7ASP

3D structure

PDB id: 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
Description: Staphylococcus aureus 70S after 50 minutes incubation at 37C
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.86 Å

Loop

Sequence: CAUGCAAGUCGAGCGAACGUUAGCGGCGGACGGG*CAC*GACUCCUACGGGAGGCAGCAG
Length: 58 nucleotides
Bulged bases: 7ASP|1|X|A|60, 7ASP|1|X|A|66, 7ASP|1|X|G|67, 7ASP|1|X|G|97, 7ASP|1|X|A|361
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7ASP|1|X|C|55
7ASP|1|X|A|56
7ASP|1|X|U|57
7ASP|1|X|G|58
7ASP|1|X|C|59
7ASP|1|X|A|60
7ASP|1|X|A|61
7ASP|1|X|G|62
7ASP|1|X|U|63
7ASP|1|X|C|64
7ASP|1|X|G|65
7ASP|1|X|A|66
7ASP|1|X|G|67
7ASP|1|X|C|68
7ASP|1|X|G|69
7ASP|1|X|A|70
7ASP|1|X|A|71
7ASP|1|X|C|72
7ASP|1|X|G|97
7ASP|1|X|U|98
7ASP|1|X|U|99
7ASP|1|X|A|100
7ASP|1|X|G|101
7ASP|1|X|C|102
7ASP|1|X|G|103
7ASP|1|X|G|104
7ASP|1|X|C|105
7ASP|1|X|G|106
7ASP|1|X|G|107
7ASP|1|X|A|108
7ASP|1|X|C|109
7ASP|1|X|G|110
7ASP|1|X|G|111
7ASP|1|X|G|112
*
7ASP|1|X|C|322
7ASP|1|X|A|323
7ASP|1|X|C|324
*
7ASP|1|X|G|345
7ASP|1|X|A|346
7ASP|1|X|C|347
7ASP|1|X|U|348
7ASP|1|X|C|349
7ASP|1|X|C|350
7ASP|1|X|U|351
7ASP|1|X|A|352
7ASP|1|X|C|353
7ASP|1|X|G|354
7ASP|1|X|G|355
7ASP|1|X|G|356
7ASP|1|X|A|357
7ASP|1|X|G|358
7ASP|1|X|G|359
7ASP|1|X|C|360
7ASP|1|X|A|361
7ASP|1|X|G|362
7ASP|1|X|C|363
7ASP|1|X|A|364
7ASP|1|X|G|365

Current chains

Chain X: 16S rRNA

Nearby chains

Chain I: 50S ribosomal protein L14
Chain N: 50S ribosomal protein L19
Chain g: 30S ribosomal protein S16
Chain j: 30S ribosomal protein S20

J3_7ASP_001