J3_7ASP_007

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UGAUCUA*UAGCGG*CCAAUCGAA

Length

22 nucleotides

Bulged bases

7ASP|1|Y|A|834, 7ASP|1|Y|G|837

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|Y|U|728
7ASP|1|Y|G|729
7ASP|1|Y|A|730
7ASP|1|Y|U|731
7ASP|1|Y|C|732
7ASP|1|Y|U|733
7ASP|1|Y|A|734
*
7ASP|1|Y|U|818
7ASP|1|Y|A|819
7ASP|1|Y|G|820
7ASP|1|Y|C|821
7ASP|1|Y|G|822
7ASP|1|Y|G|823
*
7ASP|1|Y|C|831
7ASP|1|Y|C|832
7ASP|1|Y|A|833
7ASP|1|Y|A|834
7ASP|1|Y|U|835
7ASP|1|Y|C|836
7ASP|1|Y|G|837
7ASP|1|Y|A|838
7ASP|1|Y|A|839

Current chains

Chain Y

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L34

Chain C

50S ribosomal protein L2

Chain Q

50S ribosomal protein L22