J3_7ASP_012
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CUGC*GCGGCCGUAACUAUAACGGUCCUAAGGUAG*CGAAAG
- Length
- 40 nucleotides
- Bulged bases
- 7ASP|1|Y|C|1941, 7ASP|1|Y|U|1944, 7ASP|1|Y|A|1998
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ASP|1|Y|C|1860
7ASP|1|Y|U|1861
7ASP|1|Y|G|1862
7ASP|1|Y|C|1863
*
7ASP|1|Y|G|1931
7ASP|1|Y|C|1932
7ASP|1|Y|G|1933
7ASP|1|Y|G|1934
7ASP|1|Y|C|1935
7ASP|1|Y|C|1936
7ASP|1|Y|G|1937
7ASP|1|Y|U|1938
7ASP|1|Y|A|1939
7ASP|1|Y|A|1940
7ASP|1|Y|C|1941
7ASP|1|Y|U|1942
7ASP|1|Y|A|1943
7ASP|1|Y|U|1944
7ASP|1|Y|A|1945
7ASP|1|Y|A|1946
7ASP|1|Y|C|1947
7ASP|1|Y|G|1948
7ASP|1|Y|G|1949
7ASP|1|Y|U|1950
7ASP|1|Y|C|1951
7ASP|1|Y|C|1952
7ASP|1|Y|U|1953
7ASP|1|Y|A|1954
7ASP|1|Y|A|1955
7ASP|1|Y|G|1956
7ASP|1|Y|G|1957
7ASP|1|Y|U|1958
7ASP|1|Y|A|1959
7ASP|1|Y|G|1960
*
7ASP|1|Y|C|1994
7ASP|1|Y|G|1995
7ASP|1|Y|A|1996
7ASP|1|Y|A|1997
7ASP|1|Y|A|1998
7ASP|1|Y|G|1999
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain X
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: