J3_7ASP_019

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGUGCCUAAUA*UAGGGAAUCU*AGCAACG

Length

28 nucleotides

Bulged bases

7ASP|1|X|U|50, 7ASP|1|X|A|52, 7ASP|1|X|A|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|X|C|44
7ASP|1|X|G|45
7ASP|1|X|U|46
7ASP|1|X|G|47
7ASP|1|X|C|48
7ASP|1|X|C|49
7ASP|1|X|U|50
7ASP|1|X|A|51
7ASP|1|X|A|52
7ASP|1|X|U|53
7ASP|1|X|A|54
*
7ASP|1|X|U|366
7ASP|1|X|A|367
7ASP|1|X|G|368
7ASP|1|X|G|369
7ASP|1|X|G|370
7ASP|1|X|A|371
7ASP|1|X|A|372
7ASP|1|X|U|373
7ASP|1|X|C|374
7ASP|1|X|U|375
*
7ASP|1|X|A|401
7ASP|1|X|G|402
7ASP|1|X|C|403
7ASP|1|X|A|404
7ASP|1|X|A|405
7ASP|1|X|C|406
7ASP|1|X|G|407

Current chains

Chain X

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S12

Chain g

30S ribosomal protein S16