J3_7ASP_021

3D structure

PDB id

7ASP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 50 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

GUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAAAUCUUGACAUC*GACAG*CUUAUGAUUUGGGCUACACAC

Length

74 nucleotides

Bulged bases

7ASP|1|X|U|966, 7ASP|1|X|A|975, 7ASP|1|X|G|981, 7ASP|1|X|A|984, 7ASP|1|X|A|985, 7ASP|1|X|G|986, 7ASP|1|X|U|991, 7ASP|1|X|U|992, 7ASP|1|X|A|993, 7ASP|1|X|U|999, 7ASP|1|X|A|1004, 7ASP|1|X|U|1223, 7ASP|1|X|U|1225, 7ASP|1|X|A|1236, 7ASP|1|X|C|1239

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7ASP|1|X|G|961
7ASP|1|X|U|962
7ASP|1|X|G|963
7ASP|1|X|G|964
7ASP|1|X|U|965
7ASP|1|X|U|966
7ASP|1|X|U|967
7ASP|1|X|A|968
7ASP|1|X|A|969
7ASP|1|X|U|970
7ASP|1|X|U|971
7ASP|1|X|C|972
7ASP|1|X|G|973
7ASP|1|X|A|974
7ASP|1|X|A|975
7ASP|1|X|G|976
7ASP|1|X|C|977
7ASP|1|X|A|978
7ASP|1|X|A|979
7ASP|1|X|C|980
7ASP|1|X|G|981
7ASP|1|X|C|982
7ASP|1|X|G|983
7ASP|1|X|A|984
7ASP|1|X|A|985
7ASP|1|X|G|986
7ASP|1|X|A|987
7ASP|1|X|A|988
7ASP|1|X|C|989
7ASP|1|X|C|990
7ASP|1|X|U|991
7ASP|1|X|U|992
7ASP|1|X|A|993
7ASP|1|X|C|994
7ASP|1|X|C|995
7ASP|1|X|A|996
7ASP|1|X|A|997
7ASP|1|X|A|998
7ASP|1|X|U|999
7ASP|1|X|C|1000
7ASP|1|X|U|1001
7ASP|1|X|U|1002
7ASP|1|X|G|1003
7ASP|1|X|A|1004
7ASP|1|X|C|1005
7ASP|1|X|A|1006
7ASP|1|X|U|1007
7ASP|1|X|C|1008
*
7ASP|1|X|G|1055
7ASP|1|X|A|1056
7ASP|1|X|C|1057
7ASP|1|X|A|1058
7ASP|1|X|G|1059
*
7ASP|1|X|C|1221
7ASP|1|X|U|1222
7ASP|1|X|U|1223
7ASP|1|X|A|1224
7ASP|1|X|U|1225
7ASP|1|X|G|1226
7ASP|1|X|A|1227
7ASP|1|X|U|1228
7ASP|1|X|U|1229
7ASP|1|X|U|1230
7ASP|1|X|G|1231
7ASP|1|X|G|1232
7ASP|1|X|G|1233
7ASP|1|X|C|1234
7ASP|1|X|U|1235
7ASP|1|X|A|1236
7ASP|1|X|C|1237
7ASP|1|X|A|1238
7ASP|1|X|C|1239
7ASP|1|X|A|1240
7ASP|1|X|C|1241

Current chains

Chain X

16S rRNA

Nearby chains

Chain a

30S ribosomal protein S10

Chain d

30S ribosomal protein S13

Chain e

30S ribosomal protein S14 type Z