J3_7ASP_022
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CAAUGGACAAUACAAAG*CAUAAAGUUGUUCUCAGUUCGGAUUGUAGU*ACUACAUGAAGCUG
- Length
- 61 nucleotides
- Bulged bases
- 7ASP|1|X|U|1251, 7ASP|1|X|U|1297, 7ASP|1|X|U|1303, 7ASP|1|X|U|1308, 7ASP|1|X|C|1309, 7ASP|1|X|U|1313, 7ASP|1|X|G|1316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ASP|1|X|C|1248
7ASP|1|X|A|1249
7ASP|1|X|A|1250
7ASP|1|X|U|1251
7ASP|1|X|G|1252
7ASP|1|X|G|1253
7ASP|1|X|A|1254
7ASP|1|X|C|1255
7ASP|1|X|A|1256
7ASP|1|X|A|1257
7ASP|1|X|U|1258
7ASP|1|X|A|1259
7ASP|1|X|C|1260
7ASP|1|X|A|1261
7ASP|1|X|A|1262
7ASP|1|X|A|1263
7ASP|1|X|G|1264
*
7ASP|1|X|C|1295
7ASP|1|X|A|1296
7ASP|1|X|U|1297
7ASP|1|X|A|1298
7ASP|1|X|A|1299
7ASP|1|X|A|1300
7ASP|1|X|G|1301
7ASP|1|X|U|1302
7ASP|1|X|U|1303
7ASP|1|X|G|1304
7ASP|1|X|U|1305
7ASP|1|X|U|1306
7ASP|1|X|C|1307
7ASP|1|X|U|1308
7ASP|1|X|C|1309
7ASP|1|X|A|1310
7ASP|1|X|G|1311
7ASP|1|X|U|1312
7ASP|1|X|U|1313
7ASP|1|X|C|1314
7ASP|1|X|G|1315
7ASP|1|X|G|1316
7ASP|1|X|A|1317
7ASP|1|X|U|1318
7ASP|1|X|U|1319
7ASP|1|X|G|1320
7ASP|1|X|U|1321
7ASP|1|X|A|1322
7ASP|1|X|G|1323
7ASP|1|X|U|1324
*
7ASP|1|X|A|1335
7ASP|1|X|C|1336
7ASP|1|X|U|1337
7ASP|1|X|A|1338
7ASP|1|X|C|1339
7ASP|1|X|A|1340
7ASP|1|X|U|1341
7ASP|1|X|G|1342
7ASP|1|X|A|1343
7ASP|1|X|A|1344
7ASP|1|X|G|1345
7ASP|1|X|C|1346
7ASP|1|X|U|1347
7ASP|1|X|G|1348
Current chains
- Chain X
- 16S rRNA
Nearby chains
- Chain a
- 30S ribosomal protein S10
- Chain d
- 30S ribosomal protein S13
- Chain e
- 30S ribosomal protein S14 type Z
- Chain p
- 30S ribosomal protein S7
- Chain q
- 30S ribosomal protein S9
Coloring options: