J3_7AZS_024
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UG*UGUUG*CGCAA
- Length
- 12 nucleotides
- Bulged bases
- 7AZS|1|16SB|A|1729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZS_024 not in the Motif Atlas
- Homologous match to J3_6CZR_024
- Geometric discrepancy: 0.1381
- The information below is about J3_6CZR_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04260.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7AZS|1|16SB|U|1701
7AZS|1|16SB|G|1702
*
7AZS|1|16SB|U|1711
7AZS|1|16SB|G|1712
7AZS|1|16SB|U|1713
7AZS|1|16SB|U|1714
7AZS|1|16SB|G|1715
*
7AZS|1|16SB|C|1726
7AZS|1|16SB|G|1727
7AZS|1|16SB|C|1728
7AZS|1|16SB|A|1729
7AZS|1|16SB|A|1730
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain MRNB
- mRNA
- Chain S2B
- 30S ribosomal protein S2
- Chain S5B
- 30S ribosomal protein S5
Coloring options: