J3_7AZS_061

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGG*CUAGAC*GUGACG

Length

15 nucleotides

Bulged bases

7AZS|1|16SB|A|1282

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZS|1|16SB|C|1215
7AZS|1|16SB|G|1216
7AZS|1|16SB|G|1217
*
7AZS|1|16SB|C|1280
7AZS|1|16SB|U|1281
7AZS|1|16SB|A|1282
7AZS|1|16SB|G|1283
7AZS|1|16SB|A|1284
7AZS|1|16SB|C|1285
*
7AZS|1|16SB|G|1379
7AZS|1|16SB|U|1380
7AZS|1|16SB|G|1381
7AZS|1|16SB|A|1382
7AZS|1|16SB|C|1383
7AZS|1|16SB|G|1384

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S12B

30S ribosomal protein S12

Chain S15B

30S ribosomal protein S15

Chain S17B

30S ribosomal protein S17

Chain S8B

30S ribosomal protein S8