J3_7AZS_076
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAUAGCUCAGUCGGUAGAGCAG*CGUGUCC*GUCC
- Length
- 34 nucleotides
- Bulged bases
- 7AZS|1|ASIB|A|9, 7AZS|1|ASIB|U|16, 7AZS|1|ASIB|C|17, 7AZS|1|ASIB|G|18, 7AZS|1|ASIB|G|19, 7AZS|1|ASIB|U|20, 7AZS|1|ASIB|U|45, 7AZS|1|ASIB|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7AZS|1|ASIB|G|5
7AZS|1|ASIB|G|6
7AZS|1|ASIB|A|7
7AZS|1|ASIB|U|8
7AZS|1|ASIB|A|9
7AZS|1|ASIB|G|10
7AZS|1|ASIB|C|11
7AZS|1|ASIB|U|12
7AZS|1|ASIB|C|13
7AZS|1|ASIB|A|14
7AZS|1|ASIB|G|15
7AZS|1|ASIB|U|16
7AZS|1|ASIB|C|17
7AZS|1|ASIB|G|18
7AZS|1|ASIB|G|19
7AZS|1|ASIB|U|20
7AZS|1|ASIB|A|21
7AZS|1|ASIB|G|22
7AZS|1|ASIB|A|23
7AZS|1|ASIB|G|24
7AZS|1|ASIB|C|25
7AZS|1|ASIB|A|26
7AZS|1|ASIB|G|27
*
7AZS|1|ASIB|C|43
7AZS|1|ASIB|G|44
7AZS|1|ASIB|U|45
7AZS|1|ASIB|G|46
7AZS|1|ASIB|U|47
7AZS|1|ASIB|C|48
7AZS|1|ASIB|C|49
*
7AZS|1|ASIB|G|65
7AZS|1|ASIB|U|66
7AZS|1|ASIB|C|67
7AZS|1|ASIB|C|68
Current chains
- Chain ASIB
- Phe-tRNA
Nearby chains
- Chain 23SB
- Large subunit ribosomal RNA; LSU rRNA
- Chain PSIB
- Transfer RNA; tRNA
- Chain S19B
- 30S ribosomal protein S19
Coloring options: