J3_7AZS_078

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAACC*GGGUGCC*GGAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZS|1|16SA|G|1627
7AZS|1|16SA|A|1628
7AZS|1|16SA|A|1629
7AZS|1|16SA|C|1630
7AZS|1|16SA|C|1631
*
7AZS|1|16SA|G|1646
7AZS|1|16SA|G|1647
7AZS|1|16SA|G|1648
7AZS|1|16SA|U|1649
7AZS|1|16SA|G|1650
7AZS|1|16SA|C|1651
7AZS|1|16SA|C|1652
*
7AZS|1|16SA|G|1661
7AZS|1|16SA|G|1662
7AZS|1|16SA|A|1663
7AZS|1|16SA|G|1664
7AZS|1|16SA|C|1665

Current chains

Chain 16SA

16S rRNA

Nearby chains

Chain 23SB

Large subunit ribosomal RNA; LSU rRNA

Chain S3A

30S ribosomal protein S3