J3_7AZY_018
3D structure
- PDB id
- 7AZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Context-specific inhibition of eukaryotic translation by macrolide antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.877 Å
Loop
- Sequence
- AC*GAUACGU*AAUCU
- Length
- 14 nucleotides
- Bulged bases
- 7AZY|1|G|C|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7AZY_018 not in the Motif Atlas
- Homologous match to J3_8P9A_067
- Geometric discrepancy: 0.1368
- The information below is about J3_8P9A_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7AZY|1|G|A|44
7AZY|1|G|C|45
*
7AZY|1|G|G|58
7AZY|1|G|A|59
7AZY|1|G|U|60
7AZY|1|G|A|61
7AZY|1|G|C|62
7AZY|1|G|G|63
7AZY|1|G|U|64
*
7AZY|1|G|A|96
7AZY|1|G|A|97
7AZY|1|G|U|98
7AZY|1|G|C|99
7AZY|1|G|U|100
Current chains
- Chain G
- 5.8S ribosomal RNA
Nearby chains
- Chain D
- 60S ribosomal protein L35-A
- Chain I
- 60S ribosomal protein L25
- Chain M
- 60S ribosomal protein L39
- Chain g
- 60S ribosomal protein L37-A
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