3D structure

PDB id
7AZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Context-specific inhibition of eukaryotic translation by macrolide antibiotics
Experimental method
ELECTRON MICROSCOPY
Resolution
2.877 Å

Loop

Sequence
AGAUGG*CGUUUCAAAG*CACCAU
Length
22 nucleotides
Bulged bases
7AZY|1|E|C|1556, 7AZY|1|E|A|1558
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AZY|1|E|A|1537
7AZY|1|E|G|1538
7AZY|1|E|A|1539
7AZY|1|E|U|1540
7AZY|1|E|G|1541
7AZY|1|E|G|1542
*
7AZY|1|E|C|1551
7AZY|1|E|G|1552
7AZY|1|E|U|1553
7AZY|1|E|U|1554
7AZY|1|E|U|1555
7AZY|1|E|C|1556
7AZY|1|E|A|1557
7AZY|1|E|A|1558
7AZY|1|E|A|1559
7AZY|1|E|G|1560
*
7AZY|1|E|C|1579
7AZY|1|E|A|1580
7AZY|1|E|C|1581
7AZY|1|E|C|1582
7AZY|1|E|A|1583
7AZY|1|E|U|1584

Current chains

Chain E
25S ribosomal RNA

Nearby chains

Chain G
5.8S ribosomal RNA; 5.8S rRNA
Chain I
60S ribosomal protein L25
Chain R
60S ribosomal protein L15-A
Chain b
60S ribosomal protein L8-A
Chain g
60S ribosomal protein L37-A
Chain x
60S ribosomal protein L2-A

Coloring options:

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