J3_7B7D_035
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAAAUUUGAAAU*AGUUGUAAUUUGGAG*CGAAG
- Length
- 32 nucleotides
- Bulged bases
- 7B7D|1|LA|U|117, 7B7D|1|LA|G|120, 7B7D|1|LA|A|121, 7B7D|1|LA|U|147, 7B7D|1|LA|G|156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7B7D|1|LA|C|113
7B7D|1|LA|A|114
7B7D|1|LA|A|115
7B7D|1|LA|A|116
7B7D|1|LA|U|117
7B7D|1|LA|U|118
7B7D|1|LA|U|119
7B7D|1|LA|G|120
7B7D|1|LA|A|121
7B7D|1|LA|A|122
7B7D|1|LA|A|123
7B7D|1|LA|U|124
*
7B7D|1|LA|A|144
7B7D|1|LA|G|145
7B7D|1|LA|U|146
7B7D|1|LA|U|147
7B7D|1|LA|G|148
7B7D|1|LA|U|149
7B7D|1|LA|A|150
7B7D|1|LA|A|151
7B7D|1|LA|U|152
7B7D|1|LA|U|153
7B7D|1|LA|U|154
7B7D|1|LA|G|155
7B7D|1|LA|G|156
7B7D|1|LA|A|157
7B7D|1|LA|G|158
*
7B7D|1|LA|C|263
7B7D|1|LA|G|264
7B7D|1|LA|A|265
7B7D|1|LA|A|266
7B7D|1|LA|G|267
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LC
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LJ
- 60S ribosomal protein L8-A
- Chain LN
- 60S ribosomal protein L13-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain Ld
- 60S ribosomal protein L35-A
- Chain Le
- 60S ribosomal protein L36-A
Coloring options: