3D structure

PDB id
7BL5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
pre-50S-ObgE particle
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
CUAAUC*GAGGUUAG*CAUAAG
Length
20 nucleotides
Bulged bases
7BL5|1|A|U|2334, 7BL5|1|A|A|2336
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7BL5|1|A|C|2295
7BL5|1|A|U|2296
7BL5|1|A|A|2297
7BL5|1|A|A|2298
7BL5|1|A|U|2299
7BL5|1|A|C|2300
*
7BL5|1|A|G|2316
7BL5|1|A|A|2317
7BL5|1|A|G|2318
7BL5|1|A|G|2319
7BL5|1|A|U|2320
7BL5|1|A|U|2321
7BL5|1|A|A|2322
7BL5|1|A|G|2323
*
7BL5|1|A|C|2332
7BL5|1|A|A|2333
7BL5|1|A|U|2334
7BL5|1|A|A|2335
7BL5|1|A|A|2336
7BL5|1|A|G|2337

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain B
5S ribosomal RNA; 5S rRNA
Chain F
50S ribosomal protein L5
Chain O
50S ribosomal protein L18
Chain W
50S ribosomal protein L27

Coloring options:

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