J3_7BL5_016

3D structure

PDB id

7BL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAUGUUGG*CCAUCAUUUAAAG*CAC

Length

25 nucleotides

Bulged bases

7BL5|1|A|U|1061, 7BL5|1|A|U|1078, 7BL5|1|A|A|1085

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL5|1|A|G|1055
7BL5|1|A|G|1056
7BL5|1|A|A|1057
7BL5|1|A|U|1058
7BL5|1|A|G|1059
7BL5|1|A|U|1060
7BL5|1|A|U|1061
7BL5|1|A|G|1062
7BL5|1|A|G|1063
*
7BL5|1|A|C|1075
7BL5|1|A|C|1076
7BL5|1|A|A|1077
7BL5|1|A|U|1078
7BL5|1|A|C|1079
7BL5|1|A|A|1080
7BL5|1|A|U|1081
7BL5|1|A|U|1082
7BL5|1|A|U|1083
7BL5|1|A|A|1084
7BL5|1|A|A|1085
7BL5|1|A|A|1086
7BL5|1|A|G|1087
*
7BL5|1|A|C|1102
7BL5|1|A|A|1103
7BL5|1|A|C|1104

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L11

Chain e

50S ribosomal protein L10