J3_7BOH_016

3D structure

PDB id

7BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7BOH|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7BOH_016 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1175

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7BOH|1|A|C|990
7BOH|1|A|U|991
7BOH|1|A|U|992
7BOH|1|A|G|993
7BOH|1|A|A|994
7BOH|1|A|C|995
7BOH|1|A|A|996
7BOH|1|A|U|997
*
7BOH|1|A|A|1044
7BOH|1|A|C|1045
7BOH|1|A|A|1046
7BOH|1|A|G|1047
*
7BOH|1|A|C|1210
7BOH|1|A|U|1211
7BOH|1|A|U|1212
7BOH|1|A|A|1213
7BOH|1|A|C|1214
7BOH|1|A|G|1215

Current chains

Chain A

RNA (1527-MER)

Nearby chains

Chain N

30S ribosomal protein S14