Loop J3_7C7A

3D structure

PDB id: 7C7A (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of yeast Ribonuclease MRP with substrate ITS1
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.8 Å

Loop

Sequence: GAAUCGUCACAAAUC*GGGUUGAAAGUC*GCUUAC
Length: 33 nucleotides
Bulged bases: 7C7A|1|A|A|25, 7C7A|1|A|G|79, 7C7A|1|A|U|81, 7C7A|1|A|U|82, 7C7A|1|A|U|88
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7C7A|1|A|G|15
7C7A|1|A|A|16
7C7A|1|A|A|17
7C7A|1|A|U|18
7C7A|1|A|C|19
7C7A|1|A|G|20
7C7A|1|A|U|21
7C7A|1|A|C|22
7C7A|1|A|A|23
7C7A|1|A|C|24
7C7A|1|A|A|25
7C7A|1|A|A|26
7C7A|1|A|A|27
7C7A|1|A|U|28
7C7A|1|A|C|29
*
7C7A|1|A|G|78
7C7A|1|A|G|79
7C7A|1|A|G|80
7C7A|1|A|U|81
7C7A|1|A|U|82
7C7A|1|A|G|83
7C7A|1|A|A|84
7C7A|1|A|A|85
7C7A|1|A|A|86
7C7A|1|A|G|87
7C7A|1|A|U|88
7C7A|1|A|C|89
*
7C7A|1|A|G|311
7C7A|1|A|C|312
7C7A|1|A|U|313
7C7A|1|A|U|314
7C7A|1|A|A|315
7C7A|1|A|C|316

Current chains

Chain A: Ribonuclease MRP RNA subunit NME1

Nearby chains

Chain B: Ribonucleases P/MRP protein subunit POP1
Chain D: RNases MRP/P 32.9 kDa subunit
Chain E: Ribonuclease P/MRP protein subunit POP5
Chain F: Ribonucleases P/MRP protein subunit POP6
Chain G: Ribonucleases P/MRP protein subunit POP7
Chain I: Ribonuclease P/MRP protein subunit RPP1
Chain J: Ribonuclease P/MRP protein subunit RPP1
Chain R: Internal Transcribed Spacer 1

J3_7C7A_002