J3_7CPV_042
3D structure
- PDB id
- 7CPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse testis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- GAAAAAAUUAGAG*CAG*CUGGAUACCGCAGC
- Length
- 30 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7CPV|1|S2|G|808
7CPV|1|S2|A|809
7CPV|1|S2|A|810
7CPV|1|S2|A|811
7CPV|1|S2|A|812
7CPV|1|S2|A|813
7CPV|1|S2|A|814
7CPV|1|S2|U|815
7CPV|1|S2|U|816
7CPV|1|S2|A|817
7CPV|1|S2|G|818
7CPV|1|S2|A|819
7CPV|1|S2|G|820
*
7CPV|1|S2|C|830
7CPV|1|S2|A|831
7CPV|1|S2|G|832
*
7CPV|1|S2|C|844
7CPV|1|S2|U|845
7CPV|1|S2|G|846
7CPV|1|S2|G|847
7CPV|1|S2|A|848
7CPV|1|S2|U|849
7CPV|1|S2|A|850
7CPV|1|S2|C|851
7CPV|1|S2|C|852
7CPV|1|S2|G|853
7CPV|1|S2|C|854
7CPV|1|S2|A|855
7CPV|1|S2|G|856
7CPV|1|S2|C|857
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4, X isoform
- Chain SJ
- 40S ribosomal protein S9
- Chain SL
- 40S ribosomal protein S11
- Chain SW
- 40S ribosomal protein S15a
- Chain SY
- 40S ribosomal protein S24
Coloring options: